PositionsPositions
PublicationsPublications
- Bordignon, F. (2025a). Moving Open Repositories out of the Blind Spot of Initiatives to Correct the Scholarly Record. Learned Publishing, 38(2). https://doi.org/10.1002/leap.1655OA3 citationsFull text
Abstract
ABSTRACT Open repositories were created to enhance access and visibility of scholarly publications, driven by open science ideals emphasising transparency and accessibility. However, they lack mechanisms to update the status of corrected or retracted publications, posing a threat to the integrity of the scholarly record. To explore the scope of the problem, a manually verified corpus was examined: we extracted all the entries in the Crossref × Retraction Watch database for which the publication date of the corrected or retracted document ranged from 2013 to 2023. This corresponded to 24,430 entries with a DOI, which we use to query Unpaywall and identify their possible indexing in HAL, an open repository (second largest institutional repository worldwide). In most cases (91%), HAL does not mention corrections. While the study needs broader scope, it highlights the necessity of improving the role of open repositories in correction processes with better curation practices. We discuss how harvesting operations and the interoperability of platforms can maintain the integrity of the entire scholarly record. Not only will the open repositories avoid damaging its reliability through ambiguous reporting, but on the contrary, they will also strengthen it.
- Bordignon, F. (2025b). On and off-the-record correction practices: A survey-based study of how chemistry researchers react to errors. Accountability in Research, 33(4), 2564106–2564106. https://doi.org/10.1080/08989621.2025.2564106OA1 citationsFull textPubMed
Abstract
AIM: This survey-based study (982 participants) explores chemistry researchers' practices and motivations in correcting errors in scientific publications. RESULTS: While respondents believe errors should be corrected in principle, practical challenges arise due to scientific, social, and pragmatic factors. These include the perceived seriousness of the error, its scientific impact, the age of the publication, and the time required. Difficulties also stem from criticizing others, especially senior colleagues. Despite these challenges, researchers are motivated to correct errors to limit their spread, contribute to the common good, and advance their own work. Researchers prefer informal error correction through private correspondence, discussions with colleagues, or teaching situations, over formal corrections to the scholarly record. The peer-review stage is crucial for detecting and correcting errors, but it is criticized for its deficiencies, including lack of professionalism among reviewers and editors. Some authors yield to reviewer pressure knowingly introducing changes that are clearly wrong. While the low participation rate (2%) does not allow generalization, the study shows that science correction is complex, involving a continuum of practices. CONCLUSION: To improve science correction, the study suggests that online platforms and repositories can facilitate the transition from off-the-record discussions to on-the-record initiatives, ultimately feeding into the public record.
- Hepkema, W. M., Bordignon, F., & Halffman, W. (2025). Out of sight out of mind: the (in)visibility of corrections in bibliographic databases, repositories, and literature tools. https://doi.org/10.14293/ease.2025.031OA0 citationsFull text
Abstract
In scholarly communication, there are several ways to communicate that scientific articles are, or may be, problematic: retractions, expressions of concern, and corrections (sometimes also called errata, corrigenda or addenda). If these notices are to alert the reader, all falls or stands with these notices being visible to the reader. While the visibility and informativity of retraction notices has been widely studied – and criticized, much less is known about corrections. This study investigates: How and to what extent are corrected papers visibly labelled as such in bibliographic databases, repositories, literature tools? Using a set of recently corrected papers with a non-trivial correction (as indicated by two or more PubPeer comments) we investigate to what degree corrected papers are visibly labelled as such in various bibliographic databases, repositories, and literature tools. The visibility of corrections varies a lot, from not notifying the reader at all (Web of Science), to having a clearly visible warning label that links to the correction notice for the majority of the articles (PubMed and Scopus). The labels used for corrections vary widely and are used inconsistently. What could be labelled as a correction notice in one database could be editorial material in another. This was further confused by inconsistent labelling of retractions, not only because retraction notices can get corrected and correction notices can be retracted, but also because articles that are corrected according to Crossref turn out to be retracted. These inconsistencies and lack of clarity call for better correction handling procedures.
- Bordignon, F., & Gambette, P. (2024). A Corpus of Critical Citations Contexts. Journal of Open Humanities Data, 10. https://doi.org/10.5334/johd.215OA2 citationsFull text
Abstract
We present here a corpus of 505 critical citation contexts, i.e. a set of sentences or propositions that contain at least one citation of a study towards which the author(s) has/have a negative opinion. Those contexts come from other existing annotated corpora, from our readings about critical citation and disagreement in science, and from contexts manually annotated by native speakers of English. We have re-annotated all those contexts in order to be sure that they match our definition of critical citations. This corpus can be helpful to train tools dedicated to the automatic retrieval of critical citations.
- Versini, P., Sayah, M. J. A., Bordignon, F., & Schertzer, D. (2023). How the concept of nature-based solutions for climate adaptation could be introduced in Master’s curricula. Insights from France. Journal of Cleaner Production, 395, 136364–136364. https://doi.org/10.1016/j.jclepro.2023.136364OA6 citations
- Bareis, J., Roßmann, M., & Bordignon, F. (2023a). Technology hype: Dealing with bold expectations and overpromising. TATuP - Zeitschrift Für Technikfolgenabschätzung in Theorie Und Praxis, 32(3), 10–71. https://doi.org/10.14512/tatup.32.3.10OA15 citationsFull text
Abstract
To date, the study of hype has become a productive but also eclectic field of research. This introduction provides an overview of the core characteristics of technology hype and distinguishes it from other future-oriented concepts. Further, the authors present promising approaches from various disciplines for studying, critiquing, and dealing with hype. The special issue assembles case studies, methodological and theoretical contributions that analyze tech hypes’ temporality, agency, and institutional dynamics. It provides insights into how hypes are triggered and fostered, but also how they can be deconstructed and anticipated.
- Bareis, J., Roßmann, M., & Bordignon, F. (2023b). Technology hypes: Practices, approaches and assessments. TATuP - Zeitschrift Für Technikfolgenabschätzung in Theorie Und Praxis, 32(3), 11–16. https://doi.org/10.14512/tatup.32.3.11OA8 citationsFull text
Abstract
To date, the study of hype has become a productive but also eclectic field of research. This introduction provides an overview of the core characteristics of technology hype and distinguishes it from other future-oriented concepts. Further, the authors present promising approaches from various disciplines for studying, critiquing, and dealing with hype. The special issue assembles case studies, methodological and theoretical contributions that analyze tech hypes’ temporality, agency, and institutional dynamics. It provides insights into how hypes are triggered and fostered, but also how they can be deconstructed and anticipated.
- Bordignon, F. (2022). Critical citations in knowledge construction and citation analysis: from paradox to definition. Scientometrics, 127(2), 959–972. https://doi.org/10.1007/s11192-021-04226-018 citations
- Bordignon, F., & Maisonobe, M. (2022). Researchers and their data: A study based on the use of the word data in scholarly articles. Quantitative Science Studies, 3(4), 1156–1178. https://doi.org/10.1162/qss_a_00220OA2 citationsFull text
Abstract
Abstract Data is one of the most used terms in scientific vocabulary. This article focuses on the relationship between data and research by analyzing the contexts of occurrence of the word data in a corpus of 72,471 research articles (1980–2012) from two distinct fields (Social sciences, Physical sciences). The aim is to shed light on the issues raised by research on data, namely the difficulty of defining what is considered as data, the transformations that data undergo during the research process, and how they gain value for researchers who hold them. Relying on the distribution of occurrences throughout the texts and over time, it demonstrates that the word data mostly occurs at the beginning and end of research articles. Adjectives and verbs accompanying the noun data turn out to be even more important than data itself in specifying data. The increase in the use of possessive pronouns at the end of the articles reveals that authors tend to claim ownership of their data at the very end of the research process. Our research demonstrates that even if data-handling operations are increasingly frequent, they are still described with imprecise verbs that do not reflect the complexity of these transformations.
PreprintsPreprints
- Hepkema, W., Bordignon, F., Halffman, W., Erden, Y., Rost, N., & Lévy, R. (2026). “PubPeer is okay, but …”: researchers’ perceptions of post-publication reviews. https://doi.org/10.31222/osf.io/nh3eg_v1OA0 citationsFull text
Abstract
ObjectiveWe study how researchers perceive comments pertaining to their papers on the debated post-publication peer review platform PubPeer.MethodsWe surveyed two groups: the commented group were researchers that received a critical comment on their article (10,603 sent, 80 respondents); and the citing group were researchers citing these articles, as a proxy for the wider community (84,325 sent, 720 respondents).ResultsAmong our respondents, the majority of commented authors knew of the PubPeer comment prior to the survey, compared to only a minority of citing authors. In both groups, the majority indicated that the issue raised on PubPeer did not affect the conclusions of their paper. Commented authors most frequently replied on PubPeer and/or contacted journal editors; citing authors largely did not act. Qualitative analysis revealed four types of defences used to minimise consequences: epistemic defence, honest error, contextual defence, and shifting responsibility. Respondents’ opinions about PubPeer varied between positive, negative and ambivalent, and anonymity was the main concern.ConclusionPubPeer's contribution to correcting the scientific record remains indirect, operating through retractions rather than through behavioural change in researchers. A diffusion of responsibility limits its correcting ambition, highlighting the need for complementary post-publication debate venues.
- Ambrosj, J., & Bordignon, F. (2026). Navigating the fragmented landscape of online scholarly communication: a taxonomy of communication patterns. https://doi.org/10.31235/osf.io/wg8dt_v1OA0 citationsFull text
Abstract
Online Scholarly Communication (SC) is a vast and fragmented landscape difficult to navigate. Traditional core activities of SC, such as registration, certification, archiving, and awareness, have not lost their importance but have changed and been distributed across actors and venues. To bring clarity, we have developed a taxonomy of communication patterns of online venues for SC, i.e. the different ways in which online venues contribute to the core activities of SC for the units of SC they deal with. In this article, we present the taxonomy built on a corpus of 465 venues, and offer examples to illustrate its intended uses and analytical potential. Our taxonomy is a research tool to map the complex reality of SC. When combined with other methods such as analysis of discourse and economic models, it can produce sophisticated analysis of online SC.
- Bordignon, F. (2025). Présentation à l’occasion de la table ronde « Éditer après la publication » aux 6e Rencontres de l’édition en sciences humaines et sociales. HAL (Le Centre pour la Communication Scientifique Directe). https://openalex.org/W44172894010 citations
- Bordignon, F. (2024). Is OpenAlex a revolution or a challenge for bibliometrics/bibliometricians? HAL (Le Centre pour la Communication Scientifique Directe). https://openalex.org/W4393329416OA0 citations
- Bordignon, F., Egret, D., & Chaignon, L. (2024). Pratiques d’intégrité scientifique et empreinte environnementale : une enquête auprès de deux établissements français. HAL (Le Centre pour la Communication Scientifique Directe). https://openalex.org/W4404531834OA0 citations
Datasets & SoftwareDatasets & Software
- Hepkema, W., & Bordignon, F. Data for " "PubPeer is okay, but …": researchers' perceptions of post-publication reviews". Zenodo (2026) [Dataset]. https://doi.org/10.5281/zenodo.20413422
- Ambrosj, J., & Bordignon, F. A taxonomy-based dataset of online venues for scholarly communication. Zenodo (2026) [Dataset]. https://doi.org/10.5281/zenodo.20410076
- Bordignon, F. Data for "On and off-the-record correction practices: A survey-based study of how chemistry researchers react to errors". Zenodo (2025) [Dataset]. https://doi.org/10.5281/zenodo.17158638
- Bordignon, F., Said, M., & Levy, R. Citation contexts of [How Many Scientists Fabricate and Falsify Research? A Systematic Review and Meta-Analysis of Survey Data, DOI: 10.1371/journal.pone.0005738]. Zenodo (2024) [Dataset]. https://doi.org/10.5281/zenodo.14417422
- Bordignon, F., Egret, D., Chaignon, L., Turanli, A., & Bulut, B. Research integrity practices and environmental impact of research: Questionnaire of the survey conducted at two French institutions. Zenodo (2024) [Dataset]. https://doi.org/10.5281/zenodo.14030424
- Bordignon, F., Gambette, P., & Avanço, K. Corpus of critical citations contexts. Zenodo (2024) [Dataset]. https://doi.org/10.5281/zenodo.10694465
- BORDIGNON, F. JACS correction notices - Dataset (2000-2023). Recherche Data Gouv (2023) [Dataset]. https://doi.org/10.57745/w7fb4w
- BORDIGNON, F. DATA_Correction_JACS.csv. Recherche Data Gouv (2023) [Dataset]. https://doi.org/10.57745/wixxli
- Bodignon, F., & Maisonobe, M. Data for "Researchers and their data. A study based on the use of the word data in scholarly articles". Zenodo (2022) [Dataset]. https://doi.org/10.5281/zenodo.5873828
- Bordignon, F. Data for: "A scientometric review of permafrost research based on textual analysis (1948-2020)". Mendeley (2020) [Dataset]. https://doi.org/10.17632/d8gvm96ykm
- Bordignon, F. Search queries to map scientific publications to the UN Sustainable Development Goals. Mendeley (2020) [Dataset]. https://doi.org/10.17632/xrx7ddbbb4
- Data For "Open Access Impact On Citations: A Case Study". Zenodo (2016) [dataset]. https://doi.org/10.5281/zenodo.60293
Peer ReviewPeer Review
- Scientometrics — 5 reviews
- Scientometrics — 4 reviews
- Learned Publishing — 3 reviews
- Data in Brief — 2 reviews
- Online Information Review — 2 reviews
- Frontiers in Research Metrics and Analytics — 2 reviews
- Information Processing & Management — 1 review
- Clinical and Experimental Dermatology — 1 review
- Science — 1 review
- Journal of Information Science — 1 review
- Cybergeo — 1 review
- eLife — 1 review
- SAGE Open — 1 review
- Journal of the Association for Information Science and Technology — 1 review